Package that provides tools for brain MRI Deep Learning pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

brainprep.qc.parse_cat12vbm_qc(qc_files)[source]¶

Parse the CAT12 VBM generated quality control files for all subjects.

Parameters:: qc_files : list of str

list of CAT12 VBM generated quality control xml files.
Returns:: df_scores : pandas DataFrame

the CAT12 VBM scores organized by ‘participant_id’, ‘session’, ‘run’, ‘NCR’, ‘ICR’, ‘IQR’.