Package that provides tools for brain MRI Deep Learning pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

brainprep.qc.plot_pca(X, df_description, outdir)[source]¶

Save the two first PCA components.

Parameters:

X : array (n_samples, …)

the input data.

df_description : pandas DataFrame

samples associated descriptons: must have ‘n_samples’ rows and a ‘participant_id’ column.

outdir : str

the destination folder.

Returns:

pca_path : str

the path to the generated file.