Package that provides tools for brain MRI Deep Learning pre-processing.
Note
This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.
- brainprep.workflow.fsreconall.brainprep_fsreconall_qc(fs_regex, outdir, euler_thr=-217)[source]ΒΆ
Define the FreeSurfer recon-all quality control workflow.
- Parameters:
fs_regex : str
regex to the FreeSurfer recon-all directories for all subjects.
outdir : str
the destination folder.
euler_thr : int, default -217
control the quality control threshold on the Euler number score.
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