Package that provides tools for brain MRI Deep Learning pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

brainprep.workflow.mriqc.brainprep_mriqc_summary(indir, outdir, filters=None)[source]¶

Provide context for the image quality metrics (IQMs) shown in the MRIQC reports.

Parameters:

indir : str

the derivatives folder with the mriqc results.

outdir : str

the destination folder with the IQMs summary.

filters : list, default None

list of filters as strings: by default filter on the scanner field.