Package that provides tools for brain MRI Deep Learning pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

brainprep.workflow.mriqc.filter_iqms(apidf, filters)[source]¶

Filters the API table based on user-provided parameters. Filter parameters should be a list of strings and string formats should be “(VAR) (Operator) (Value)”.

Example: [‘TR == 3.0’] or [‘TR > 1.0’,’FD < .3’]

Parameters:

apidf : DataFrame

API table.

filters : list

list of filters as strings.

Returns:

filterdf : DataFrame

table containing data pulled from the mriqc API, but filtered to contain only your match specifications.

Notes

Each filter element is SPACE separated!