nidl.datasets: Available datasets

This modules details the public API you should use and implement for a nidl compatible dataset, as well as the datasets available in nidl.

Introduction

nidl offers tools to easily download publicly available neuroimaging datasets. If you use any of them, please visit the corresponding website (linked in each description) and make sure you comply with any data usage agreement and you acknowledge the corresponding authors’ publications.

nidl also offers tools to fetch datasets available on you local machine in a coherent and reproducible way.

Local Fetchers

Base classes for to create a local fetcher.

BaseImageDataset(root, patterns, channels, ...)

Scalable neuroimaging dataset that uses files.

BaseNumpyDataset(root, patterns, channels[, ...])

Neuroimaging dataset that uses numpy arrays and memory mapping.

ImageDataFrameDataset(rootdir, df[, ...])

Dataset for loading images from a pandas DataFrame.

General Population

Classes to fetch publicly available neuroimaging datasets.

OpenBHB(root[, modality, target, split, ...])

OpenBHB dataset [R32a5d1ff9dee-1].